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2023 Accepted Papers

Paper Title
Paper Authors
Integrating Machine Learning and Molecular Modeling with Directed Evolution
Azam Hussain, Charles L. Brooks III
PINDER: The protein interface dataset and resource
Mehmet Akdel, Alexander Goncearenco, Yusuf Adeshina, Daniel Kovtun, David Baugher, David Baugher, Dylan Abramson, Céline Marquet, Tomas Geffner, Zachary Carpenter, Luca Naef, Michael Bronstein
Molecular Machine Learning for Battery Electrolyte Design
Shang Zhu, Venkatasubramanian Viswanathan
Substrate Scope Contrastive Loss: Repurposing Human Bias to Learn Representations of Reactive Atoms
Wenhao Gao, Priyanka Raghavan, Ron Shprints, Connor W. Coley
Generative Marginalization Models
Sulin Liu, Peter J. Ramadge, Ryan P. Adams
MiniFold: Simple, Fast, Accurate Protein Structure Prediction
Jeremy Wohlwend, Mateo Reveiz, Axel Feldmann, Wengong Jin, Regina Barzilay
Towards Understanding Generalization for Machine Learning for Mass Spectrometry
Khoo Ling Min Serena, Peter Mikhael, Regina Barzilay
Conditional Protein Design via Doob’s h-transform
Kieran Didi, Francisco Vargas, Simon Mathis, Vincent Dutordoir, Emile Mathieu, Urszula Julia Komorowska, Pietro Lio
Using Fragmentation Graphs for Metabolite Annotation
Yan Zhou Chen, Soha Hassoun
Towards Foundational Models for Molecular Learning on Large-Scale Multi-Task Datasets
Dominique Beaini, Shenyang Huang, Joao Alex Cunha, Gabriela Moisescu-Pareja, Oleksandr Dymov, Samuel Maddrell-Mander, Callum McLean, Frederik Wenkel, Luis Müller, Jama Hussein Mohamud, Ali Parviz, Michael Craig, Michał Koziarski, Jiarui Lu, Zhaocheng Zhu, Cristian Gabellini, Kerstin Klaser, Josef Dean, Cas Wognum, Maciej Sypetkowski, Guillaume Rabusseau, Reihaneh Rabbany, Jian Tang, Christopher Morris, Ioannis Koutis, Mirco Ravanelli, Guy Wolf, Prudencio Tossou, Hadrien Mary, Therence Bois, Andrew Fitzgibbon, Błażej Banaszewski, Chad Martin, Dominic Masters
Evaluating Molecular Graph Representations within Context
Hanchen Wang
Plausible Baselines for Molecular Conformer Generation
Eric Alcaide, Gengmo Zhou, Ziyao Li

Accepted Posters

The following table displays the accepted posters and which poster session they will be part of. We will announce accepted posters on Oct. 18, 2023.

Poster Format

  1. Posters should be sized 48” x 36”, and oriented in landscape.

  2. All posters should be physically printed. No screens will be available for electronic posters.

  3. Posters should be printed and brought to the conference on November 8, 2023. Please do not mount your poster on foam core. We will provide push pins for you to affix your poster to the poster board.

 

Poster Session

  1. Location. The poster session will take place on the 1st floor of the Koch Institute in the main hallway and in Luria Auditorium.

  2. Schedule and Map. Board numbers and board assignments will be provided day-of at the Registration Table.

Last updated: Aug. 10, 2023

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